8VYN image
Entry Detail
PDB ID:
8VYN
EMDB ID:
Title:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, composite map (global and local) and model
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2024-02-09
Release Date:
2024-09-18
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Envelope glycoprotein B
Mutations:T100L, V134C, H222C, A267I, I653C, E657C
Chain IDs:A, B, C
Chain Length:786
Number of Molecules:3
Biological Source:Human betaherpesvirus 5
Polymer Type:polypeptide(L)
Description:7H3 Fab Heavy Chain
Chain IDs:D, H, L
Chain Length:234
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:7H3 Fab Light Chain
Chain IDs:E, I, M
Chain Length:216
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:1G2 Fab Heavy Chain
Chain IDs:F, J, N
Chain Length:224
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:1G2 Fab Light Chain
Chain IDs:G, K, O
Chain Length:214
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure-based design of a soluble human cytomegalovirus glycoprotein B antigen stabilized in a prefusion-like conformation.
Proc.Natl.Acad.Sci.USA 121 e2404250121 e2404250121 (2024)
PMID: 39231203 DOI: 10.1073/pnas.2404250121

Abstact

Human cytomegalovirus (HCMV) glycoprotein B (gB) is a class III membrane fusion protein required for viral entry. HCMV vaccine candidates containing gB have demonstrated moderate clinical efficacy, but no HCMV vaccine has been approved. Here, we used structure-based design to identify and characterize amino acid substitutions that stabilize gB in its metastable prefusion conformation. One variant containing two engineered interprotomer disulfide bonds and two cavity-filling substitutions (gB-C7), displayed increased expression and thermostability. A 2.8 Å resolution cryoelectron microscopy structure shows that gB-C7 adopts a prefusion-like conformation, revealing additional structural elements at the membrane-distal apex. Unlike previous observations for several class I viral fusion proteins, mice immunized with postfusion or prefusion-stabilized forms of soluble gB protein displayed similar neutralizing antibody titers, here specifically against an HCMV laboratory strain on fibroblasts. Collectively, these results identify initial strategies to stabilize class III viral fusion proteins and provide tools to probe gB-directed antibody responses.

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Primary Citation of related structures