8VXD image
Deposition Date 2024-02-04
Release Date 2024-05-08
Last Version Date 2024-05-08
Entry Detail
PDB ID:
8VXD
Title:
Structure of Casein kinase I isoform delta (CK1d) complexed with inhibitor 7
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.47 Å
R-Value Free:
0.29
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Casein kinase I isoform delta
Gene (Uniprot):CSNK1D
Chain IDs:A, B
Chain Length:300
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure-Based Optimization of Selective and Brain Penetrant CK1 delta Inhibitors for the Treatment of Circadian Disruptions.
Acs Med.Chem.Lett. 15 486 492 (2024)
PMID: 38628796 DOI: 10.1021/acsmedchemlett.3c00523

Abstact

Neuropsychiatric disorders such as major depressive disorders and schizophrenia are often associated with disruptions to the normal 24 h sleep wake cycle. Casein kinase 1 (CK1δ) is an integral part of the molecular machinery that regulates circadian rhythms. Starting from a cluster of bicyclic pyrazoles identified from a virtual screening effort, we utilized structure-based drug design to identify and reinforce a unique "hinge-flip" binding mode that provides a high degree of selectivity for CK1δ versus the kinome. Pharmacokinetics, brain exposure, and target engagement as measured by ex vivo autoradiography are described for advanced analogs.

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Primary Citation of related structures