8VTI image
Deposition Date 2024-01-26
Release Date 2024-12-11
Last Version Date 2025-05-21
Entry Detail
PDB ID:
8VTI
Title:
Latrophilin-3 (ADGRL3) HormR and GAIN domains in the context of the holoreceptor
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Isoform 4 of Adhesion G protein-coupled receptor L3
Gene (Uniprot):ADGRL3
Chain IDs:A
Chain Length:375
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Isoform 4 of Adhesion G protein-coupled receptor L3
Gene (Uniprot):ADGRL3
Chain IDs:B
Chain Length:314
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:sAB Light Chain
Chain IDs:C
Chain Length:215
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Molecule:sAB Heavy Chain
Chain IDs:D
Chain Length:235
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Conformational coupling between extracellular and transmembrane domains modulates holo-adhesion GPCR function.
Nat Commun 15 10545 10545 (2024)
PMID: 39627215 DOI: 10.1038/s41467-024-54836-4

Abstact

Adhesion G Protein-Coupled Receptors (aGPCRs) are key cell-adhesion molecules involved in numerous physiological functions. aGPCRs have large multi-domain extracellular regions (ECRs) containing a conserved GAIN domain that precedes their seven-pass transmembrane domain (7TM). Ligand binding and mechanical force applied on the ECR regulate receptor function. However, how the ECR communicates with the 7TM remains elusive, because the relative orientation and dynamics of the ECR and 7TM within a holoreceptor is unclear. Here, we describe the cryo-EM reconstruction of an aGPCR, Latrophilin3/ADGRL3, and reveal that the GAIN domain adopts a parallel orientation to the transmembrane region and has constrained movement. Single-molecule FRET experiments unveil three slow-exchanging FRET states of the ECR relative to the transmembrane region within the holoreceptor. GAIN-targeted antibodies, and cancer-associated mutations at the GAIN-7TM interface, alter FRET states, cryo-EM conformations, and receptor signaling. Altogether, this data demonstrates conformational and functional coupling between the ECR and 7TM, suggesting an ECR-mediated mechanism for aGPCR activation.

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Primary Citation of related structures
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