8VSE image
Deposition Date 2024-01-23
Release Date 2024-11-06
Last Version Date 2025-05-21
Entry Detail
PDB ID:
8VSE
Keywords:
Title:
Cryo-EM structure of human CD45 extracellular region in complex with adenoviral protein E3/49K
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Receptor-type tyrosine-protein phosphatase C
Gene (Uniprot):PTPRC
Chain IDs:A, B
Chain Length:551
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:45.5kDa protein
Gene (Uniprot):49K
Chain IDs:C
Chain Length:343
Number of Molecules:1
Biological Source:Human adenovirus 19a
Ligand Molecules
Primary Citation
Orientation-dependent CD45 inhibition with viral and engineered ligands.
Sci Immunol 9 eadp0707 eadp0707 (2024)
PMID: 39454026 DOI: 10.1126/sciimmunol.adp0707

Abstact

CD45 is a cell surface phosphatase that shapes the T cell receptor signaling threshold but does not have a known ligand. A family of adenovirus proteins, including E3/49K, exploits CD45 to evade immunity by binding to the extracellular domain of CD45, resulting in the suppression of T cell signaling. We determined the cryo-EM structure of this complex and found that the E3/49K protein is composed of three immunoglobulin domains assembled as "beads on a string" that compel CD45 into a closely abutted dimer by cross-linking the CD45 D3 domain, leading to steric inhibition of its intracellular phosphatase activity. Inspired by the E3/49K mechanism, we engineered CD45 surrogate ligands that can fine-tune T cell activation by dimerizing CD45 into different orientations and proximities. The adenovirus E3/49K protein has taught us that, despite a lack of a known ligand, CD45 activity can be modulated by extracellular dimerizing ligands that perturb its phosphatase activity and alter T cell responses.

Legend

Protein

Chemical

Disease

Primary Citation of related structures