8VQE image
Deposition Date 2024-01-18
Release Date 2024-11-06
Last Version Date 2025-05-14
Entry Detail
PDB ID:
8VQE
Title:
Homodimeric structure of HER2 S310F extracellular region
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.67 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Receptor tyrosine-protein kinase erbB-2/hIgG1 Fc domain fusion
Gene (Uniprot):ERBB2
Mutagens:S310F
Chain IDs:A, B
Chain Length:894
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Selective targeting of oncogenic hotspot mutations of the HER2 extracellular domain.
Nat.Chem.Biol. 21 706 715 (2025)
PMID: 39438724 DOI: 10.1038/s41589-024-01751-w

Abstact

Oncogenic mutations in the extracellular domain (ECD) of cell-surface receptors could serve as tumor-specific antigens that are accessible to antibody therapeutics. Such mutations have been identified in receptor tyrosine kinases including HER2. However, it is challenging to selectively target a point mutant, while sparing the wild-type protein. Here we developed antibodies selective to HER2 S310F and S310Y, the two most common oncogenic mutations in the HER2 ECD, via combinatorial library screening and structure-guided design. Cryogenic-electron microscopy structures of the HER2 S310F homodimer and an antibody bound to HER2 S310F revealed that these antibodies recognize the mutations in a manner that mimics the dimerization arm of HER2 and thus inhibit HER2 dimerization. These antibodies as T cell engagers selectively killed a HER2 S310F-driven cancer cell line in vitro, and in vivo as a xenograft. These results validate HER2 ECD mutations as actionable therapeutic targets and offer promising candidates toward clinical development.

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Protein

Chemical

Disease

Primary Citation of related structures
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