ISDA

Deposition Date 2024-01-15

Release Date 2025-01-15

Last Version Date 2025-01-15

Entry Detail

PDB ID:

8VOD

Keywords:

PROTEIN TRANSPORT

Title:

Crystal structure of mouse Vps29 bound to DENND4C peptide

Biological Source:

Source Organism:

Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.12 Å

R-Value Free:

0.24

R-Value Work:

0.19

R-Value Observed:

0.20

Space Group:

P 32 2 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Vacuolar protein sorting-associated protein 29
Gene (Uniprot):Vps29
Chain IDs:A
Chain Length:188
Number of Molecules:1
Biological Source:Mus musculus

UniProt ID:Q9QZ88 Pfam ID:PF12850

Protein Blast

Polymer Type:polypeptide(L)
Molecule:ALA-LYS-VAL-VAL-GLN-ARG-GLU-ASP-VAL-GLU-THR-GLY-LEU-ASP-PRO-LEU-SER-LEU
Gene (Uniprot):DENND4C
Chain IDs:B
Chain Length:18
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q5VZ89

Ligand Molecules

GOL

Primary Citation

Mapping the endosomal proximity proteome reveals Retromer as a hub for RAB GTPase regulation

Anton-Plagaro, C, Chen, K.E, Guo, Q, Liu, M, Evans, A.J, Lewis, P.A, Heesom, K.J, Wilkinson, K.A, Collins, B.M, Cullen, P.J.Show

Biorxiv ? ? ? (2024)

DOI: 10.1101/2024.11.22.622898

Primary Citation of related structures