8VO6 image
Entry Detail
PDB ID:
8VO6
EMDB ID:
Title:
Cryo-EM structure of fascin bound to F-actin (actin binding site 2)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-01-14
Release Date:
2025-01-15
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fascin
Chain IDs:A
Chain Length:498
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Actin, alpha skeletal muscle
Chain IDs:B (auth: E), C (auth: F), D (auth: G)
Chain Length:373
Number of Molecules:3
Biological Source:Gallus gallus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
HIC B HIS modified residue
Primary Citation
Fascin structural plasticity mediates flexible actin bundle construction.
Nat.Struct.Mol.Biol. 32 940 952 (2025)
PMID: 39833469 DOI: 10.1038/s41594-024-01477-2

Abstact

Fascin cross-links actin filaments (F-actin) into bundles that support tubular membrane protrusions including filopodia and stereocilia. Fascin dysregulation drives aberrant cell migration during metastasis, and fascin inhibitors are under development as cancer therapeutics. Here, we use cryo-EM, cryo-electron tomography coupled with custom denoising and computational modeling to probe human fascin-1's F-actin cross-linking mechanisms across spatial scales. Our fascin cross-bridge structure reveals an asymmetric F-actin binding conformation that is allosterically blocked by the inhibitor G2. Reconstructions of seven-filament hexagonal bundle elements, variability analysis and simulations show how structural plasticity enables fascin to bridge varied interfilament orientations, accommodating mismatches between F-actin's helical symmetry and bundle hexagonal packing. Tomography of many-filament bundles and modeling uncover geometric rules underlying emergent fascin binding patterns, as well as the accumulation of unfavorable cross-links that limit bundle size. Collectively, this work shows how fascin harnesses fine-tuned nanoscale structural dynamics to build and regulate micron-scale F-actin bundles.

Legend

Protein

Chemical

Disease

Primary Citation of related structures