8VM2 image
Entry Detail
PDB ID:
8VM2
Title:
Crystal Structure of NRAS Q61K bound to GTP
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-01-12
Release Date:
2024-05-01
Method Details:
Experimental Method:
Resolution:
1.74 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GTPase NRas
Mutations:Q61K
Chain IDs:A, B, C
Chain Length:190
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Crystal structure of NRAS Q61K with a ligand-induced pocket near switch II.
Eur J Cell Biol 103 151414 151414 (2024)
PMID: 38640594 DOI: 10.1016/j.ejcb.2024.151414

Abstact

The RAS isoforms (KRAS, HRAS and NRAS) have distinct cancer type-specific profiles. NRAS mutations are the second most prevalent RAS mutations in skin and hematological malignancies. Although RAS proteins were considered undruggable for decades, isoform and mutation-specific investigations have produced successful RAS inhibitors that are either specific to certain mutants, isoforms (pan-KRAS) or target all RAS proteins (pan-RAS). While extensive structural and biochemical investigations have focused mainly on K- and H-RAS mutations, NRAS mutations have received less attention, and the most prevalent NRAS mutations in human cancers, Q61K and Q61R, are rare in K- and H-RAS. This manuscript presents a crystal structure of the NRAS Q61K mutant in the GTP-bound form. Our structure reveals a previously unseen pocket near switch II induced by the binding of a ligand to the active form of the protein. This observation reveals a binding site that can potentially be exploited for development of inhibitors against mutant NRAS. Furthermore, the well-resolved catalytic site of this GTPase bound to native GTP provides insight into the stalled GTP hydrolysis observed for NRAS-Q61K.

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