8VG6 image
Deposition Date 2023-12-22
Release Date 2024-12-25
Last Version Date 2026-01-14
Entry Detail
PDB ID:
8VG6
Keywords:
Title:
Structure of Tulane virus
Biological Source:
Source Organism(s):
Tulane virus (Taxon ID: 512169)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Capsid protein
Chain IDs:A, B, C
Chain Length:534
Number of Molecules:3
Biological Source:Tulane virus
Ligand Molecules
Primary Citation
Antibody-Based Affinity Cryoelectron Microscopy at 2.6- angstrom Resolution.
Structure 24 1984 1990 (2016)
PMID: 27806259 DOI: 10.1016/j.str.2016.09.008

Abstact

The affinity cryoelectron microscopy (cryo-EM) approach has been explored in recent years to simplify and/or improve the sample preparation for cryo-EM, which can bring previously challenging specimens such as those of low abundance and/or unpurified ones within reach of the cryo-EM technique. Despite the demonstrated successes for solving structures to low to intermediate resolutions, the lack of near-atomic structures using this approach has led to a common perception of affinity cryo-EM as a niche technique incapable of reaching high resolutions. Here, we report a ∼2.6-Å structure solved using the antibody-based affinity grid approach with low-concentration Tulane virus purified from a low-yield cell-culture system that has been challenging to standard cryo-EM grid preparation. Quantitative analyses of the structure indicate data and reconstruction quality comparable with the conventional grid preparation method using samples at high concentration.

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Protein

Chemical

Disease

Primary Citation of related structures
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