8VG2 image
Deposition Date 2023-12-22
Release Date 2024-08-07
Last Version Date 2025-06-04
Entry Detail
PDB ID:
8VG2
Keywords:
NUCLEAR PROTEIN/DNA
Title:
Cryo-EM structure of FoxA1 and GATA4 in complex with H14 chromatosome
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.04 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8VG2 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H3.1
Gene (Uniprot):H3C1, H3C2, H3C3, H3C4, H3C6, H3C7, H3C8, H3C10, H3C11, H3C12
Chain IDs:A, E
Chain Length:136
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P68431 Pfam ID:PF00125
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H4
Gene (Uniprot):H4C1, H4C2, H4C3, H4C4, H4C5, H4C6, H4C8, H4C9, H4C11, H4C12, H4C13, H4C14, H4C15, H4C16
Chain IDs:B, F
Chain Length:103
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P62805 Pfam ID:PF15511
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2A type 1-B/E
Gene (Uniprot):H2AC4, H2AC8
Chain IDs:C, G
Chain Length:130
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P04908 Pfam ID:PF00125, PF16211
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2B type 1-J
Gene (Uniprot):H2BC11
Chain IDs:D, H
Chain Length:126
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P06899 Pfam ID:PF00125
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (196-MER)
Chain IDs:I
Chain Length:211
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (196-MER)
Chain IDs:J
Chain Length:211
Number of Molecules:1
Biological Source:synthetic construct
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hepatocyte nuclear factor 3-alpha
Gene (Uniprot):FOXA1
Chain IDs:K (auth: O)
Chain Length:478
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P55317 Pfam ID:PF08430, PF00250, PF09354
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H1.4
Gene (Uniprot):H1-4
Chain IDs:L (auth: U)
Chain Length:225
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P10412 Pfam ID:PF00538
Ligand Molecules
NA
Primary Citation
Cryo-EM structure of FoxA1 and GATA4 in complex with H14 chromatosome
Mol.Cell ? ? ? (2024)
Primary Citation of related structures
8VG2