8VDL image
Entry Detail
PDB ID:
8VDL
Keywords:
Title:
HB3VAR03 CIDRa1.4 domain with C7 Fab
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2023-12-15
Release Date:
2024-10-09
Method Details:
Experimental Method:
Resolution:
2.68 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:HB3VAR03 CIDRa1.4 domain
Chain IDs:A (auth: C)
Chain Length:164
Number of Molecules:1
Biological Source:Plasmodium falciparum HB3
Polymer Type:polypeptide(L)
Description:C7 Heavy Chain
Chain IDs:B (auth: H)
Chain Length:241
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:C7 Light Chain
Chain IDs:C (auth: L)
Chain Length:212
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation

Abstact

Malaria pathology is driven by the accumulation of Plasmodium falciparum-infected erythrocytes in microvessels1. This process is mediated by the polymorphic erythrocyte membrane protein 1 (PfEMP1) adhesion proteins of the parasite. A subset of PfEMP1 variants that bind to human endothelial protein C receptor (EPCR) through their CIDRα1 domains is responsible for severe malaria pathogenesis2. A longstanding question is whether individual antibodies can recognize the large repertoire of circulating PfEMP1 variants. Here we describe two broadly reactive and inhibitory human monoclonal antibodies to CIDRα1. The antibodies isolated from two different individuals exhibited similar and consistent EPCR-binding inhibition of diverse CIDRα1 domains, representing five of the six subclasses of CIDRα1. Both antibodies inhibited EPCR binding of both recombinant full-length and native PfEMP1 proteins, as well as parasite sequestration in bioengineered 3D human brain microvessels under physiologically relevant flow conditions. Structural analyses of the two antibodies in complex with three different CIDRα1 antigen variants reveal similar binding mechanisms that depend on interactions with three highly conserved amino acid residues of the EPCR-binding site in CIDRα1. These broadly reactive antibodies are likely to represent a common mechanism of acquired immunity to severe malaria and offer novel insights for the design of a vaccine or treatment targeting severe malaria.

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Primary Citation of related structures