8V9U image
Entry Detail
PDB ID:
8V9U
Keywords:
Title:
Solution NMR structure of human DNMT1 N-terminal alpha-helical domain
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-12-09
Release Date:
2024-02-28
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
30
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DNA (cytosine-5)-methyltransferase 1
Chain IDs:A
Chain Length:81
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Identification of a conserved alpha-helical domain at the N terminus of human DNA methyltransferase 1.
J.Biol.Chem. 300 105775 105775 (2024)
PMID: 38382673 DOI: 10.1016/j.jbc.2024.105775

Abstact

In vertebrates, DNA methyltransferase 1 (DNMT1) contributes to preserving DNA methylation patterns, ensuring the stability and heritability of epigenetic marks important for gene expression regulation and the maintenance of cellular identity. Previous structural studies have elucidated the catalytic mechanism of DNMT1 and its specific recognition of hemimethylated DNA. Here, using solution nuclear magnetic resonance spectroscopy and small-angle X-ray scattering, we demonstrate that the N-terminal region of human DNMT1, while flexible, encompasses a conserved globular domain with a novel α-helical bundle-like fold. This work expands our understanding of the structure and dynamics of DNMT1 and provides a structural framework for future functional studies in relation with this new domain.

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