8V6M image
Entry Detail
PDB ID:
8V6M
EMDB ID:
Title:
Inactivated-state cryo-EM structure of human TRPV3 in presence of tetrahydrocannabivarin (THCV) in cNW30 nanodiscs
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-12-01
Release Date:
2024-04-17
Method Details:
Experimental Method:
Resolution:
3.63 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Transient receptor potential cation channel subfamily V member 3
Chain IDs:A, B, C, D
Chain Length:808
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site.
Sci Adv 10 eadn2453 eadn2453 (2024)
PMID: 38691614 DOI: 10.1126/sciadv.adn2453

Abstact

TRPV3 represents both temperature- and ligand-activated transient receptor potential (TRP) channel. Physiologically relevant opening of TRPV3 channels by heat has been captured structurally, while opening by agonists has only been observed in structures of mutant channels. Here, we present cryo-EM structures that illuminate opening and inactivation of wild-type human TRPV3 in response to binding of two types of agonists: either the natural cannabinoid tetrahydrocannabivarin (THCV) or synthetic agonist 2-aminoethoxydiphenylborane (2-APB). We found that THCV binds to the vanilloid site, while 2-APB binds to the S1-S4 base and ARD-TMD linker sites. Despite binding to distally located sites, both agonists induce similar pore opening and cause dissociation of a lipid that occupies the vanilloid site in their absence. Our results uncover different but converging allosteric pathways through which small-molecule agonists activate TRPV3 and provide a framework for drug design and understanding the role of lipids in ion channel function.

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