ISDA

Entry Detail

PDB ID:

8V5U

Keywords:

HYDROLASE

Title:

Human SIRT3 bound to p53-AMC peptide and Honokiol

Biological Source:

Source Organism:

Homo sapiens

Host Organism:

Escherichia coli 'BL21-Gold(DE3)pLysS AG'

PDB Version:

Deposition Date:

2023-12-01

Release Date:

2024-11-06

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.48 Å

R-Value Free:

0.24

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:NAD-dependent protein deacetylase sirtuin-3, mitochondrial
Chain IDs:A
Chain Length:282
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9NTG7 Pfam ID:PF02146 EC:2.3.1.24

Polymer Type:polypeptide(L)
Description:p53-AMC peptide
Chain IDs:B
Chain Length:5
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

Y4T

Primary Citation

Computationally Driven Discovery and Characterization of SIRT3-Activating Compounds that Fully Recover Catalytic Activity under ${\mathrm{NAD}}^{+}$ Depletion

Guan, X, Dumpati, R.K, Munshi, S, Chall, S, Bose, R, Rahnamoun, A, Reverdy, C, Errasti, G, Delacroix, T, Ghosh, A, Chakrabarti, R.Show

Phys. Rev. X 14 ? ? (2024)

DOI: 10.1103/PhysRevX.14.041019

Primary Citation of related structures