8V1L image
Deposition Date 2023-11-20
Release Date 2024-02-14
Last Version Date 2024-02-14
Entry Detail
PDB ID:
8V1L
Title:
Crystal structure of the NTF2L domain of human G3BP1 in complex with small molecule
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.68 Å
R-Value Free:
0.39
R-Value Work:
0.27
R-Value Observed:
0.28
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ras GTPase-activating protein-binding protein 1
Gene (Uniprot):G3BP1
Chain IDs:A, B, C, D, E, F
Chain Length:139
Number of Molecules:6
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Identification of small molecule inhibitors of G3BP-driven stress granule formation.
J.Cell Biol. 223 ? ? (2024)
PMID: 38284934 DOI: 10.1083/jcb.202308083

Abstact

Stress granule formation is triggered by the release of mRNAs from polysomes and is promoted by the action of the RNA-binding proteins G3BP1/2. Stress granules have been implicated in several disease states, including cancer and neurodegeneration. Consequently, compounds that limit stress granule formation or promote their dissolution have potential as both experimental tools and novel therapeutics. Herein, we describe two small molecules, G3BP inhibitor a and b (G3Ia and G3Ib), designed to bind to a specific pocket in G3BP1/2 that is targeted by viral inhibitors of G3BP1/2 function. In addition to disrupting the co-condensation of RNA, G3BP1, and caprin 1 in vitro, these compounds inhibit stress granule formation in cells treated prior to or concurrent with stress and dissolve pre-existing stress granules. These effects are consistent across multiple cell types and a variety of initiating stressors. Thus, these compounds represent powerful tools to probe the biology of stress granules and hold promise for therapeutic interventions designed to modulate stress granule formation.

Legend

Protein

Chemical

Disease

Primary Citation of related structures