ISDA

Deposition Date 2023-11-08

Release Date 2023-11-22

Last Version Date 2025-05-28

Entry Detail

PDB ID:

8UX1

Keywords:

NUCLEAR PROTEIN

Title:

Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle

Biological Source:

Source Organism:

Drosophila melanogaster (Taxon ID: 7227)
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.50 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H3
Mutations:C110S
Chain IDs:A, E
Chain Length:136
Number of Molecules:2
Biological Source:Drosophila melanogaster

UniProt ID:P02299 Pfam ID:PF00125

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H4
Gene (Uniprot):His4, His4r, His4:CG31611, His4:CG33869, His4:CG33871, His4:CG33873, His4:CG33875, His4:CG33877, His4:CG33879, His4:CG33881, His4:CG33883, His4:CG33885, His4:CG33887, His4:CG33889, His4:CG33891, His4:CG33893, His4:CG33895, His4:CG33897, His4:CG33899, His4:CG33901, His4:CG33903, His4:CG33905, His4:CG33907, His4:CG33909
Chain IDs:B, F
Chain Length:104
Number of Molecules:2
Biological Source:Drosophila melanogaster

UniProt ID:P84040 Pfam ID:PF15511

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H2A
Gene (Uniprot):His2A, His2A:CG31618, His2A:CG33808, His2A:CG33814, His2A:CG33817, His2A:CG33820, His2A:CG33823, His2A:CG33826, His2A:CG33829, His2A:CG33832, His2A:CG33835, His2A:CG33838, His2A:CG33841, His2A:CG33844, His2A:CG33847, His2A:CG33850, His2A:CG33862, His2A:CG33865
Chain IDs:C, G
Chain Length:124
Number of Molecules:2
Biological Source:Drosophila melanogaster

UniProt ID:P84051 Pfam ID:PF00125, PF16211

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H2B
Gene (Uniprot):His2B, His2B:CG17949, His2B:CG33868, His2B:CG33870, His2B:CG33872, His2B:CG33874, His2B:CG33876, His2B:CG33878, His2B:CG33880, His2B:CG33882, His2B:CG33884, His2B:CG33886, His2B:CG33888, His2B:CG33890, His2B:CG33892, His2B:CG33894, His2B:CG33896, His2B:CG33898, His2B:CG33900, His2B:CG33902, His2B:CG33904, His2B:CG33906, His2B:CG33908, His2B:CG33910
Chain IDs:D, H
Chain Length:125
Number of Molecules:2
Biological Source:Drosophila melanogaster

UniProt ID:P02283 Pfam ID:PF00125

Polymer Type:polydeoxyribonucleotide
Molecule:153-bp Widom 601 DNA forward strand
Chain IDs:I
Chain Length:153
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:153-bp Widom 601 DNA reverse strand
Chain IDs:J
Chain Length:153
Number of Molecules:1
Biological Source:synthetic construct

Protein Blast

Polymer Type:polypeptide(L)
Molecule:GTP-binding nuclear protein Ran
Gene (Uniprot):RAN
Chain IDs:K
Chain Length:216
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62826 Pfam ID:PF00071

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Regulator of chromosome condensation
Gene (Uniprot):RCC1
Chain IDs:L
Chain Length:420
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P18754 Pfam ID:PF00415

Ligand Molecules

Primary Citation

Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle

Huang, S.K, Rubinstein, J.L, Kay, L.E.Show

To Be Published ? ? ? (?)

Primary Citation of related structures