8UME image
Entry Detail
PDB ID:
8UME
EMDB ID:
Keywords:
Title:
Influenza A virus Hemagglutinin H5/Vietnam/1204/2004 in complex with D04 Fab
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2023-10-17
Release Date:
2024-12-25
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Hemagglutinin
Chain IDs:A (auth: B), H (auth: C), I (auth: A)
Chain Length:547
Number of Molecules:3
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Description:Fab Heavy chain
Chain IDs:B (auth: H), D, F (auth: E)
Chain Length:228
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Fab Light chain
Chain IDs:C (auth: L), E (auth: F), G
Chain Length:221
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Human naive B cells recognize prepandemic influenza virus hemagglutinins.
Sci Immunol 10 eado9572 eado9572 (2025)
PMID: 39854479 DOI: 10.1126/sciimmunol.ado9572

Abstact

Understanding the naïve B cell repertoire and its specificity for potential zoonotic threats, such as the highly pathogenic avian influenza (HPAI) H5Nx viruses, may allow prediction of infection- or vaccine-specific responses. However, this naïve repertoire and the possibility to respond to emerging, prepandemic viruses are largely undetermined. Here, we profiled naïve B cell reactivity against a prototypical HPAI H5 hemagglutinin (HA), the major target of antibody responses. We found that the frequency of H5-specific human naïve B cells targeting the HA "head" domain was increased relative to cross-reactive B cells to a circulating seasonal H1N1 strain. We classified the isolated monoclonal antibodies (mAbs) by the HA epitopes engaged and found that selected mAbs neutralized H5N1 at germline. We determined a cryo-electron microscopic structure of one mAb in complex with H5 HA to define its epitope. Our study defines the naïve human B cell repertoire recognizing a potentially zoonotic HPAI.

Legend

Protein

Chemical

Disease

Primary Citation of related structures