8UME image
Deposition Date 2023-10-17
Release Date 2024-12-25
Last Version Date 2025-02-05
Entry Detail
PDB ID:
8UME
Keywords:
Title:
Influenza A virus Hemagglutinin H5/Vietnam/1204/2004 in complex with D04 Fab
Biological Source:
Source Organism:
Influenza A virus (Taxon ID: 11320)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin
Gene (Uniprot):HA
Chain IDs:A (auth: B), H (auth: C), I (auth: A)
Chain Length:547
Number of Molecules:3
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:Fab Heavy chain
Chain IDs:B (auth: H), D, F (auth: E)
Chain Length:228
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Fab Light chain
Chain IDs:C (auth: L), E (auth: F), G
Chain Length:221
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Human naive B cells recognize prepandemic influenza virus hemagglutinins.
Sci Immunol 10 eado9572 eado9572 (2025)
PMID: 39854479 DOI: 10.1126/sciimmunol.ado9572

Abstact

Understanding the naïve B cell repertoire and its specificity for potential zoonotic threats, such as the highly pathogenic avian influenza (HPAI) H5Nx viruses, may allow prediction of infection- or vaccine-specific responses. However, this naïve repertoire and the possibility to respond to emerging, prepandemic viruses are largely undetermined. Here, we profiled naïve B cell reactivity against a prototypical HPAI H5 hemagglutinin (HA), the major target of antibody responses. We found that the frequency of H5-specific human naïve B cells targeting the HA "head" domain was increased relative to cross-reactive B cells to a circulating seasonal H1N1 strain. We classified the isolated monoclonal antibodies (mAbs) by the HA epitopes engaged and found that selected mAbs neutralized H5N1 at germline. We determined a cryo-electron microscopic structure of one mAb in complex with H5 HA to define its epitope. Our study defines the naïve human B cell repertoire recognizing a potentially zoonotic HPAI.

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Primary Citation of related structures