ISDA: 8UH4

Deposition Date 2023-10-06

Release Date 2023-11-22

Last Version Date 2025-12-03

Entry Detail

PDB ID:

8UH4

Keywords:

VIRUS/DNA

Title:

Cryo-EM structure of Maize Streak Virus (MSV) - single head Geminivirus

Biological Source:

Source Organism:

Maize streak virus - [Nigeria] (Taxon ID: 10823)

Host Organism:

Agrobacterium tumefaciens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.72 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Capsid protein
Gene (Uniprot):V1
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: a), BA (auth: b), CA (auth: c), DA (auth: d), EA (auth: e), FA (auth: f), GA (auth: g), HA (auth: h), IA (auth: i), JA (auth: j), KA (auth: k), LA (auth: l), MA (auth: m), NA (auth: n), OA (auth: o), PA (auth: p), QA (auth: q), RA (auth: r), SA (auth: s), TA (auth: t), UA (auth: u), VA (auth: v), WA (auth: w), XA (auth: x), YA (auth: y), ZA (auth: z), AB (auth: 1), BB (auth: 2), CB (auth: 3), DB (auth: 4), EB (auth: 5), FB (auth: 6), GB (auth: 7), HB (auth: 8)
Chain Length:243
Number of Molecules:60
Biological Source:Maize streak virus - [Nigeria]

UniProt ID:P06448 Pfam ID:PF00844

Polymer Type:polydeoxyribonucleotide
Molecule:genomic DNA
Chain IDs:IB (auth: AA), JB (auth: AB), KB (auth: AC), LB (auth: AD), MB (auth: AE), NB (auth: AF), OB (auth: AG), PB (auth: AH), QB (auth: AI), RB (auth: AJ), SB (auth: AK), TB (auth: AL), UB (auth: AM), VB (auth: AN), WB (auth: AO), XB (auth: AP), YB (auth: AQ), ZB (auth: AR), AC (auth: AS), BC (auth: AT), CC (auth: AU), DC (auth: AV), EC (auth: AW), FC (auth: AX), GC (auth: AY), HC (auth: AZ), IC (auth: Aa), JC (auth: Ab), KC (auth: Ac), LC (auth: Ad), MC (auth: Ae), NC (auth: Af), OC (auth: Ag), PC (auth: Ah), QC (auth: Ai), RC (auth: Aj), SC (auth: Ak), TC (auth: Al), UC (auth: Am), VC (auth: An), WC (auth: Ao), XC (auth: Ap), YC (auth: Aq), ZC (auth: Ar), AD (auth: As), BD (auth: At), CD (auth: Au), DD (auth: Av), ED (auth: Aw), FD (auth: Ax), GD (auth: Ay), HD (auth: Az), ID (auth: A1), JD (auth: A2), KD (auth: A3), LD (auth: A4), MD (auth: A5), ND (auth: A6), OD (auth: A7), PD (auth: A8)
Chain Length:9
Number of Molecules:60
Biological Source:Maize streak virus genotype A (isolate Nigeria)

Ligand Molecules

Primary Citation

The Two States of MSV Gemini Capsid Assembly

Bennett, A.D, McKenna, R.Show

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Primary Citation of related structures

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