8UCA image
Entry Detail
PDB ID:
8UCA
EMDB ID:
Title:
Formation of I2+III2 supercomplex rescues respiratory chain defects
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-09-26
Release Date:
2025-01-15
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 1
Chain IDs:D (auth: 1), RA (auth: 1a)
Chain Length:318
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 2
Chain IDs:I (auth: 2), WA (auth: 2a)
Chain Length:345
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 3
Chain IDs:A (auth: 3), OA (auth: 3a)
Chain Length:115
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 1, mitochondrial
Chain IDs:CC (auth: 3A), MC (auth: 3L)
Chain Length:115
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 2, mitochondrial
Chain IDs:DC (auth: 3B), NC (auth: 3M)
Chain Length:439
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b
Chain IDs:EC (auth: 3C), OC (auth: 3N)
Chain Length:380
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome c1, heme protein, mitochondrial
Chain IDs:FC (auth: 3D), PC (auth: 3O)
Chain Length:241
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 9
Chain IDs:GC (auth: 3E), QC (auth: 3P)
Chain Length:196
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 7
Chain IDs:HC (auth: 3F), RC (auth: 3Q)
Chain Length:110
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 8
Chain IDs:IC (auth: 3G), SC (auth: 3R)
Chain Length:81
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 6, mitochondrial
Chain IDs:JC (auth: 3H), TC (auth: 3S)
Chain Length:76
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 9
Chain IDs:KC (auth: 3J), VC (auth: 3U)
Chain Length:63
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit 10
Chain IDs:LC (auth: 3K), WC (auth: 3V)
Chain Length:56
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Cytochrome b-c1 complex subunit Rieske, mitochondrial
Chain IDs:UC (auth: 3T)
Chain Length:78
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 4
Chain IDs:H (auth: 4), VA (auth: 4a)
Chain Length:459
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 4L
Chain IDs:F (auth: 4L), TA (auth: 4l)
Chain Length:98
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 5
Chain IDs:G (auth: 5), UA (auth: 5a)
Chain Length:607
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase chain 6
Chain IDs:E (auth: 6), SA (auth: 6a)
Chain Length:172
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Chain IDs:V (auth: A1), JB (auth: a1)
Chain Length:70
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Chain IDs:N (auth: A2), BB (auth: a2)
Chain Length:99
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3
Chain IDs:W (auth: A3), KB (auth: a3)
Chain Length:84
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
Chain IDs:Q (auth: A5), EB (auth: a5)
Chain Length:116
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Chain IDs:R (auth: A6), FB (auth: a6)
Chain Length:131
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7
Chain IDs:MA (auth: A7), AC (auth: a7)
Chain Length:112
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
Chain IDs:S (auth: A8), GB (auth: a8)
Chain Length:172
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial
Chain IDs:K (auth: A9), YA (auth: a9)
Chain Length:377
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Acyl carrier protein, mitochondrial
Chain IDs:O (auth: AB), P (auth: AC), CB (auth: ab), DB (auth: ac)
Chain Length:156
Number of Molecules:4
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
Chain IDs:J (auth: AL), XA (auth: al)
Chain Length:355
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
Chain IDs:T (auth: AM), HB (auth: am)
Chain Length:142
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Chain IDs:LA (auth: AN), ZB (auth: an)
Chain Length:145
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
Chain IDs:U (auth: AO), IB (auth: ao)
Chain Length:144
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1
Chain IDs:AA (auth: B1), OB (auth: b1)
Chain Length:57
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial
Chain IDs:EA (auth: B2), SB (auth: b2)
Chain Length:105
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3
Chain IDs:FA (auth: B3), TB (auth: b3)
Chain Length:104
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
Chain IDs:HA (auth: B4), VB (auth: b4)
Chain Length:129
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial
Chain IDs:CA (auth: B5), QB (auth: b5)
Chain Length:189
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6
Chain IDs:DA (auth: B6), RB (auth: b6)
Chain Length:127
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
Chain IDs:JA (auth: B7), XB (auth: b7)
Chain Length:136
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Chain IDs:GA (auth: B8), UB (auth: b8)
Chain Length:186
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
Chain IDs:IA (auth: B9), WB (auth: b9)
Chain Length:179
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
Chain IDs:KA (auth: BL), YB (auth: bl)
Chain Length:176
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial
Chain IDs:BA (auth: BM), PB (auth: bm)
Chain Length:151
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial
Chain IDs:X (auth: C1), LB (auth: c1)
Chain Length:76
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] 1 subunit C2
Chain IDs:Y (auth: C2), MB (auth: c2)
Chain Length:120
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Chain IDs:ZC (auth: S1), ED (auth: s1)
Chain Length:716
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial
Chain IDs:C (auth: S2), QA (auth: s2)
Chain Length:463
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial
Chain IDs:B (auth: S3), PA (auth: s3)
Chain Length:263
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Chain IDs:L (auth: S4), ZA (auth: s4)
Chain Length:175
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 5
Chain IDs:Z (auth: S5), NB (auth: s5)
Chain Length:106
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Chain IDs:M (auth: S6), AB (auth: s6)
Chain Length:116
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
Chain IDs:AD (auth: S7), FD (auth: s7)
Chain Length:224
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
Chain IDs:BD (auth: S8), GD (auth: s8)
Chain Length:212
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
Chain IDs:XC (auth: V1), CD (auth: v1)
Chain Length:457
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
Chain IDs:YC (auth: V2), DD (auth: v2)
Chain Length:244
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial
Chain IDs:NA (auth: V3), BC (auth: v3)
Chain Length:104
Number of Molecules:2
Biological Source:Mus musculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
2MR C ARG modified residue
Primary Citation

Abstact

Mitochondrial electron transport chain (ETC) complexes partition between free complexes and quaternary assemblies known as supercomplexes (SCs). However, the physiological requirement for SCs and the mechanisms regulating their formation remain controversial. Here, we show that genetic perturbations in mammalian ETC complex III (CIII) biogenesis stimulate the formation of a specialized extra-large SC (SC-XL) with a structure of I2+III2, resolved at 3.7 Å by cryoelectron microscopy (cryo-EM). SC-XL formation increases mitochondrial cristae density, reduces CIII reactive oxygen species (ROS), and sustains normal respiration despite a 70% reduction in CIII activity, effectively rescuing CIII deficiency. Consequently, inhibiting SC-XL formation in CIII mutants using the Uqcrc1DEL:E258-D260 contact site mutation leads to respiratory decompensation. Lastly, SC-XL formation promotes fatty acid oxidation (FAO) and protects against ischemic heart failure in mice. Our study uncovers an unexpected plasticity in the mammalian ETC, where structural adaptations mitigate intrinsic perturbations, and suggests that manipulating SC-XL formation is a potential therapeutic strategy for mitochondrial dysfunction.

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Primary Citation of related structures