8UBX image
Entry Detail
PDB ID:
8UBX
EMDB ID:
Title:
Ethanolamine-bound FLVCR1
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-09-25
Release Date:
2024-03-27
Method Details:
Experimental Method:
Resolution:
2.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Heme transporter FLVCR1
Chain IDs:A
Chain Length:555
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural basis of lipid head group entry to the Kennedy pathway by FLVCR1.
Nature 629 710 716 (2024)
PMID: 38693265 DOI: 10.1038/s41586-024-07374-4

Abstact

Phosphatidylcholine and phosphatidylethanolamine, the two most abundant phospholipids in mammalian cells, are synthesized de novo by the Kennedy pathway from choline and ethanolamine, respectively1-6. Despite the essential roles of these lipids, the mechanisms that enable the cellular uptake of choline and ethanolamine remain unknown. Here we show that the protein encoded by FLVCR1, whose mutation leads to the neurodegenerative syndrome posterior column ataxia and retinitis pigmentosa7-9, transports extracellular choline and ethanolamine into cells for phosphorylation by downstream kinases to initiate the Kennedy pathway. Structures of FLVCR1 in the presence of choline and ethanolamine reveal that both metabolites bind to a common binding site comprising aromatic and polar residues. Despite binding to a common site, FLVCR1 interacts in different ways with the larger quaternary amine of choline in and with the primary amine of ethanolamine. Structure-guided mutagenesis identified residues that are crucial for the transport of ethanolamine, but dispensable for choline transport, enabling functional separation of the entry points into the two branches of the Kennedy pathway. Altogether, these studies reveal how FLVCR1 is a high-affinity metabolite transporter that serves as the common origin for phospholipid biosynthesis by two branches of the Kennedy pathway.

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Primary Citation of related structures