8UA6 image
Deposition Date 2023-09-20
Release Date 2024-11-06
Last Version Date 2025-01-08
Entry Detail
PDB ID:
8UA6
Keywords:
Title:
Cryo-EM Structure of SCF-FBOX22-BACH1BTB
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cullin-1
Gene (Uniprot):CUL1
Chain IDs:E (auth: A)
Chain Length:764
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:S-phase kinase-associated protein 1
Gene (Uniprot):SKP1
Chain IDs:D (auth: B)
Chain Length:160
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:F-box only protein 22
Gene (Uniprot):FBXO22
Chain IDs:A (auth: C)
Chain Length:403
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription regulator protein BACH1
Gene (Uniprot):BACH1
Chain IDs:B (auth: D), C (auth: E)
Chain Length:122
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Recognition of BACH1 quaternary structure degrons by two F-box proteins under oxidative stress.
Cell 187 7568 7584.e22 (2024)
PMID: 39504958 DOI: 10.1016/j.cell.2024.10.012

Abstact

Ubiquitin-dependent proteolysis regulates diverse cellular functions with high substrate specificity, which hinges on the ability of ubiquitin E3 ligases to decode the targets' degradation signals, i.e., degrons. Here, we show that BACH1, a transcription repressor of antioxidant response genes, features two distinct unconventional degrons encrypted in the quaternary structure of its homodimeric BTB domain. These two degrons are both functionalized by oxidative stress and are deciphered by two complementary E3s. FBXO22 recognizes a degron constructed by the BACH1 BTB domain dimer interface, which is unmasked from transcriptional co-repressors after oxidative stress releases BACH1 from chromatin. When this degron is impaired by oxidation, a second BACH1 degron manifested by its destabilized BTB dimer is probed by a pair of FBXL17 proteins that remodels the substrate into E3-bound monomers for ubiquitination. Our findings highlight the multidimensionality of protein degradation signals and the functional complementarity of different ubiquitin ligases targeting the same substrate.

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Primary Citation of related structures