8U5G image
Deposition Date 2023-09-12
Release Date 2023-12-06
Last Version Date 2024-01-03
Entry Detail
PDB ID:
8U5G
Keywords:
Title:
Crystal structure of the co-expressed SDS22:PP1:I3 complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
F 4 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
Gene (Uniprot):PPP1CA
Chain IDs:A
Chain Length:299
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Protein phosphatase 1 regulatory subunit 7
Gene (Uniprot):PPP1R7
Chain IDs:B
Chain Length:310
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase PPP1R11
Gene (Uniprot):PPP1R11
Chain IDs:C
Chain Length:46
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
The SDS22:PP1:I3 complex: SDS22 binding to PP1 loosens the active site metal to prime metal exchange.
J.Biol.Chem. 300 105515 105515 (2023)
PMID: 38042495 DOI: 10.1016/j.jbc.2023.105515

Abstact

SDS22 and Inhibitor-3 (I3) are two ancient regulators of protein phosphatase 1 (PP1) that regulate multiple essential biological processes. Both SDS22 and I3 form stable dimeric complexes with PP1; however, and atypically for PP1 regulators, they also form a triple complex, where both proteins bind to PP1 simultaneously (SPI complex). Here we report the crystal structure of the SPI complex. While both regulators bind PP1 in conformations identical to those observed in their individual PP1 complexes, PP1 adopts the SDS22-bound conformation, which lacks its M1 metal. Unexpectedly, surface plasmon resonance (SPR) revealed that the affinity of I3 for the SDS22:PP1 complex is ∼10-fold lower than PP1 alone. We show that this change in binding affinity is solely due to the interaction of I3 with the PP1 active site, specifically PP1's M2 metal, demonstrating that SDS22 likely allows for PP1 M2 metal exchange and thus PP1 biogenesis.

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