8U5B image
Entry Detail
PDB ID:
8U5B
EMDB ID:
Title:
Cryo-EM structure of human claudin-4 complex with Clostridium perfringens enterotoxin C-terminal domain and sFab COP-1
Biological Source:
PDB Version:
Deposition Date:
2023-09-12
Release Date:
2023-09-27
Method Details:
Experimental Method:
Resolution:
5.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Claudin-4
Chain IDs:A
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Heat-labile enterotoxin B chain
Chain IDs:B
Chain Length:125
Number of Molecules:1
Biological Source:Clostridium perfringens
Polymer Type:polypeptide(L)
Description:COP-1 sFab Heavy Chain
Chain IDs:D (auth: H)
Chain Length:261
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Description:COP-1 sFab Light Chain
Chain IDs:C (auth: L)
Chain Length:215
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Structural and biophysical insights into targeting of claudin-4 by a synthetic antibody fragment.
Commun Biol 7 733 733 (2024)
PMID: 38886509 DOI: 10.1038/s42003-024-06437-6

Abstact

Claudins are a 27-member family of ~25 kDa membrane proteins that integrate into tight junctions to form molecular barriers at the paracellular spaces between endothelial and epithelial cells. As the backbone of tight junction structure and function, claudins are attractive targets for modulating tissue permeability to deliver drugs or treat disease. However, structures of claudins are limited due to their small sizes and physicochemical properties-these traits also make therapy development a challenge. Here we report the development of a synthetic antibody fragment (sFab) that binds human claudin-4 and the determination of a high-resolution structure of it bound to claudin-4/enterotoxin complexes using cryogenic electron microscopy. Structural and biophysical results reveal this sFabs mechanism of select binding to human claudin-4 over other homologous claudins and establish the ability of sFabs to bind hard-to-target claudins to probe tight junction structure and function. The findings provide a framework for tight junction modulation by sFabs for tissue-selective therapies.

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Primary Citation of related structures