8U41 image
Deposition Date 2023-09-08
Release Date 2024-07-17
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8U41
Keywords:
Title:
OvsA from Halomonas utahensis, an ovoselenol-biosynthetic selenoxide synthase in complex with histidine
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.72 Å
R-Value Free:
0.24
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Selenoxide synthase OvsA
Chain IDs:A, B
Chain Length:472
Number of Molecules:2
Biological Source:Halomonas utahensis
Primary Citation
Discovery of the selenium-containing antioxidant ovoselenol derived from convergent evolution.
Nat.Chem. 16 1868 1875 (2024)
PMID: 39143299 DOI: 10.1038/s41557-024-01600-2

Abstact

Selenium is an essential micronutrient, but its presence in biology has been limited to protein and nucleic acid biopolymers. The recent identification of a biosynthetic pathway for selenium-containing small molecules suggests that there is a larger family of selenometabolites that remains to be discovered. Here we identify a recently evolved branch of abundant and uncharacterized metalloenzymes that we predict are involved in selenometabolite biosynthesis using a bioinformatic search strategy that relies on the mapping of composite active site motifs. Biochemical studies confirm this prediction and show that these enzymes form an unusual C-Se bond onto histidine, thus giving rise to a distinct selenometabolite and potent antioxidant that we have termed ovoselenol. Aside from providing insights into the evolution of this enzyme class and the structural basis of C-Se bond formation, our work offers a blueprint for charting the microbial selenometabolome in the future.

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