8U20 image
Entry Detail
PDB ID:
8U20
Title:
A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 5
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-09-05
Release Date:
2024-01-31
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Green Fluorescent Protein Variant #5, ccGFP 5
Chain IDs:A, B
Chain Length:229
Number of Molecules:2
Biological Source:Corynactis californica
Primary Citation
Engineering highly stable variants of Corynactis californica green fluorescent proteins.
Protein Sci. 33 e4886 e4886 (2024)
PMID: 38151801 DOI: 10.1002/pro.4886

Abstact

Fluorescent proteins (FPs) are versatile biomarkers that facilitate effective detection and tracking of macromolecules of interest in real time. Engineered FPs such as superfolder green fluorescent protein (sfGFP) and superfolder Cherry (sfCherry) have exceptional refolding capability capable of delivering fluorescent readout in harsh environments where most proteins lose their native functions. Our recent work on the development of a split FP from a species of strawberry anemone, Corynactis californica, delivered pairs of fragments with up to threefold faster complementation than split GFP. We present the biophysical, biochemical, and structural characteristics of five full-length variants derived from these split C. californica GFP (ccGFP). These ccGFP variants are more tolerant under chemical denaturation with up to 8 kcal/mol lower unfolding free energy than that of the sfGFP. It is likely that some of these ccGFP variants could be suitable as biomarkers under more adverse environments where sfGFP fails to survive. A structural analysis suggests explanations of the variations in stabilities among the ccGFP variants.

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Primary Citation of related structures