8TWD image
Entry Detail
PDB ID:
8TWD
Title:
Structure of IraM-bound RssB
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-08-20
Release Date:
2024-01-10
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.27
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Anti-adapter protein IraM
Chain IDs:A, B
Chain Length:81
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Description:Regulator of RpoS
Chain IDs:C, D
Chain Length:337
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
IraM remodels the RssB segmented helical linker to stabilize sigma s against degradation by ClpXP.
J.Biol.Chem. 300 105568 105568 (2023)
PMID: 38103640 DOI: 10.1016/j.jbc.2023.105568

Abstact

Upon Mg2+ starvation, a condition often associated with virulence, enterobacteria inhibit the ClpXP-dependent proteolysis of the master transcriptional regulator, σs, via IraM, a poorly understood antiadaptor that prevents RssB-dependent loading of σs onto ClpXP. This inhibition results in σs accumulation and expression of stress resistance genes. Here, we report on the structural analysis of RssB bound to IraM, which reveals that IraM induces two folding transitions within RssB, amplified via a segmented helical linker. These conformational changes result in an open, yet inhibited RssB structure in which IraM associates with both the C-terminal and N-terminal domains of RssB and prevents binding of σs to the 4-5-5 face of the N-terminal receiver domain. This work highlights the remarkable structural plasticity of RssB and reveals how a stress-specific RssB antagonist modulates a core stress response pathway that could be leveraged to control biofilm formation, virulence, and the development of antibiotic resistance.

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Primary Citation of related structures