8TW6 image
Deposition Date 2023-08-20
Release Date 2024-10-02
Last Version Date 2024-11-20
Entry Detail
PDB ID:
8TW6
Keywords:
Title:
TCR in nanodisc ND-II
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TCR alpha
Chain IDs:B (auth: A)
Chain Length:274
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T cell receptor beta variable 6-5,T cell receptor beta chain MC.7.G5,MCHERRY
Gene (Uniprot):TRBV6-5, mCherry, TRB
Chain IDs:C (auth: B)
Chain Length:556
Number of Molecules:1
Biological Source:Homo sapiens, Escherichia coli str. K-12 substr. MG1655
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 delta chain
Gene (Uniprot):CD3D
Chain IDs:F (auth: D)
Chain Length:171
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 epsilon chain
Gene (Uniprot):CD3E
Chain IDs:D (auth: E), E (auth: F)
Chain Length:207
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 gamma chain
Gene (Uniprot):CD3G
Chain IDs:G
Chain Length:190
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 zeta chain, GFP fusion protein,GFP
Gene (Uniprot):CD247
Chain IDs:A (auth: Y), H (auth: X)
Chain Length:412
Number of Molecules:2
Biological Source:Homo sapiens, human respiratory syncytial virus
Primary Citation
The resting and ligand-bound states of the membrane-embedded human T-cell receptor-CD3 complex.
Biorxiv ? ? ? (2024)
PMID: 37662363 DOI: 10.1101/2023.08.22.554360

Abstact

The T-cell receptor (TCR) initiates T-lymphocyte activation, but mechanistic questions remain(1-4). Here, we present cryogenic electron microscopy structures for the unliganded and human leukocyte antigen (HLA)-bound human TCR-CD3 complex in nanodiscs that provide a native-like lipid environment. Distinct from the "open and extended" conformation seen in detergent(5-8), the unliganded TCR-CD3 in nanodiscs adopts two related "closed and compacted" conformations that represent its physiologic resting state in vivo . By contrast, the HLA-bound complex adopts the open and extended conformation, and conformation-locking disulfide mutants show that ectodomain opening is necessary for maximal ligand-dependent T-cell activation. Together, these results reveal allosteric conformational change during TCR activation and highlight the importance of native-like lipid environments for membrane protein structure determination.

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Primary Citation of related structures