8TV9 image
Deposition Date 2023-08-17
Release Date 2024-03-06
Last Version Date 2024-11-20
Entry Detail
PDB ID:
8TV9
Keywords:
Title:
Inner Mat-T4P complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
8.15 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fimbrial protein
Gene (Uniprot):F902_00908
Chain IDs:B (auth: AA), C (auth: AB), D (auth: AC), E (auth: AD), F (auth: AE), G (auth: AF), H (auth: AG), I (auth: AH), J (auth: AI), K (auth: AJ), L (auth: AK), M (auth: AL), N (auth: AM), O (auth: AN), P (auth: AO), Q (auth: AP), R (auth: AQ), S (auth: AR)
Chain Length:70
Number of Molecules:18
Biological Source:Acinetobacter genomosp. 16BJ
Polymer Type:polypeptide(L)
Molecule:Fimbrial protein
Gene (Uniprot):F902_00908
Chain IDs:T (auth: AS), U (auth: AT), V (auth: AU), W (auth: AV), X (auth: AW), Y (auth: AX), Z (auth: AY), AA (auth: AZ), BA, CA (auth: BB), DA (auth: BC), EA (auth: BD), FA (auth: BE), GA (auth: BF), HA (auth: BG), IA (auth: BH), JA (auth: BI), KA (auth: BJ)
Chain Length:69
Number of Molecules:18
Biological Source:Acinetobacter genomosp. 16BJ
Polymer Type:polypeptide(L)
Molecule:Maturation protein
Chain IDs:A (auth: a)
Chain Length:534
Number of Molecules:1
Biological Source:Acinetobacter phage AP205
Primary Citation
Structural basis of Acinetobacter type IV pili targeting by an RNA virus.
Nat Commun 15 2746 2746 (2024)
PMID: 38553443 DOI: 10.1038/s41467-024-47119-5

Abstact

Acinetobacters pose a significant threat to human health, especially those with weakened immune systems. Type IV pili of acinetobacters play crucial roles in virulence and antibiotic resistance. Single-stranded RNA bacteriophages target the bacterial retractile pili, including type IV. Our study delves into the interaction between Acinetobacter phage AP205 and type IV pili. Using cryo-electron microscopy, we solve structures of the AP205 virion with an asymmetric dimer of maturation proteins, the native Acinetobacter type IV pili bearing a distinct post-translational pilin cleavage, and the pili-bound AP205 showing its maturation proteins adapted to pilin modifications, allowing each phage to bind to one or two pili. Leveraging these results, we develop a 20-kilodalton AP205-derived protein scaffold targeting type IV pili in situ, with potential for research and diagnostics.

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Primary Citation of related structures