8TH7 image
Entry Detail
PDB ID:
8TH7
Title:
Crystal Structure of the G3BP1 NTF2-like domain bound to the Caprin1 peptide
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-07-14
Release Date:
2024-03-20
Method Details:
Experimental Method:
Resolution:
2.88 Å
R-Value Free:
0.27
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ras GTPase-activating protein-binding protein 1
Chain IDs:A, B
Chain Length:140
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Caprin-1
Chain IDs:C, D
Chain Length:22
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation

Abstact

G3BP1/2 are paralogous proteins that promote stress granule formation in response to cellular stresses, including viral infection. The nucleocapsid (N) protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) inhibits stress granule assembly and interacts with G3BP1/2 via an ITFG motif, including residue F17, in the N protein. Prior studies examining the impact of the G3PB1-N interaction on SARS-CoV-2 replication have produced inconsistent findings, and the role of this interaction in pathogenesis is unknown. Here, we use structural and biochemical analyses to define the residues required for G3BP1-N interaction and structure-guided mutagenesis to selectively disrupt this interaction. We find that N-F17A mutation causes highly specific loss of interaction with G3BP1/2. SARS-CoV-2 N-F17A fails to inhibit stress granule assembly in cells, has decreased viral replication, and causes decreased pathology in vivo. Further mechanistic studies indicate that the N-F17-mediated G3BP1-N interaction promotes infection by limiting sequestration of viral genomic RNA (gRNA) into stress granules.

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