8TEW image
Entry Detail
PDB ID:
8TEW
EMDB ID:
Keywords:
Title:
Human cytomegalovirus penton vertex, CVSC-bound configuration
Biological Source:
PDB Version:
Deposition Date:
2023-07-07
Release Date:
2024-03-06
Method Details:
Experimental Method:
Resolution:
3.02 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Major capsid protein
Chain IDs:A (auth: 1), I (auth: H), J (auth: I), K (auth: J), L (auth: K), M (auth: L), N (auth: M)
Chain Length:1370
Number of Molecules:7
Biological Source:Human herpesvirus 5 strain AD169
Polymer Type:polypeptide(L)
Description:Small capsomere-interacting protein
Chain IDs:B (auth: 2), O (auth: N), P (auth: O), Q (auth: P), R (auth: Q), S (auth: R), T (auth: S)
Chain Length:75
Number of Molecules:7
Biological Source:Human herpesvirus 5 strain AD169
Polymer Type:polypeptide(L)
Description:Large structural phosphoprotein
Chain IDs:C (auth: 3), AA (auth: Z)
Chain Length:1048
Number of Molecules:2
Biological Source:Human herpesvirus 5 strain AD169
Polymer Type:polypeptide(L)
Description:Large tegument protein deneddylase
Chain IDs:D (auth: A), E (auth: C)
Chain Length:2241
Number of Molecules:2
Biological Source:Human herpesvirus 5 strain AD169
Polymer Type:polypeptide(L)
Description:Capsid vertex component 2
Chain IDs:F (auth: E), G (auth: F)
Chain Length:642
Number of Molecules:2
Biological Source:Human herpesvirus 5 strain AD169
Polymer Type:polypeptide(L)
Description:Capsid vertex component 1
Chain IDs:H (auth: G)
Chain Length:594
Number of Molecules:1
Biological Source:Human herpesvirus 5 strain AD169
Polymer Type:polypeptide(L)
Description:Triplex capsid protein 1
Chain IDs:U (auth: T), X (auth: W)
Chain Length:290
Number of Molecules:2
Biological Source:Human herpesvirus 5 strain AD169
Polymer Type:polypeptide(L)
Description:Triplex capsid protein 2
Chain IDs:V (auth: U), W (auth: V), Y (auth: X), Z (auth: Y)
Chain Length:306
Number of Molecules:4
Biological Source:Human herpesvirus 5 strain AD169
Ligand Molecules
Primary Citation
The incredible bulk: Human cytomegalovirus tegument architectures uncovered by AI-empowered cryo-EM.
Sci Adv 10 eadj1640 eadj1640 (2024)
PMID: 38394211 DOI: 10.1126/sciadv.adj1640

Abstact

The compartmentalization of eukaryotic cells presents considerable challenges to the herpesvirus life cycle. The herpesvirus tegument, a bulky proteinaceous aggregate sandwiched between herpesviruses' capsid and envelope, is uniquely evolved to address these challenges, yet tegument structure and organization remain poorly characterized. We use deep-learning-enhanced cryogenic electron microscopy to investigate the tegument of human cytomegalovirus virions and noninfectious enveloped particles (NIEPs; a genome packaging-aborted state), revealing a portal-biased tegumentation scheme. We resolve atomic structures of portal vertex-associated tegument (PVAT) and identify multiple configurations of PVAT arising from layered reorganization of pUL77, pUL48 (large tegument protein), and pUL47 (inner tegument protein) assemblies. Analyses show that pUL77 seals the last-packaged viral genome end through electrostatic interactions, pUL77 and pUL48 harbor a head-linker-capsid-binding motif conducive to PVAT reconfiguration, and pUL47/48 dimers form 45-nm-long filaments extending from the portal vertex. These results provide a structural framework for understanding how herpesvirus tegument facilitates and evolves during processes spanning viral genome packaging to delivery.

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Primary Citation of related structures