ISDA

Entry Detail

PDB ID:

8T9B

Keywords:

IMMUNE SYSTEM

Title:

Structure of the CK variant of Fab F1 (FabC-F1) in complex with the C-terminal FN3 domain of EphA2

Biological Source:

Source Organism:

Homo sapiens

Host Organism:

Homo sapiens

PDB Version:

Deposition Date:

2023-06-23

Release Date:

2024-05-01

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

4.20 Å

R-Value Free:

0.31

R-Value Work:

0.29

R-Value Observed:

0.29

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Description:CK variant of Fab F1 heavy chain
Chain IDs:A (auth: C), C (auth: A), E (auth: D), G (auth: F)
Chain Length:237
Number of Molecules:4
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Description:CK variant of Fab F1 light chain
Mutations:HAGLSSP replaced by QGTTS
Chain IDs:B (auth: G), D (auth: B), F (auth: E), H
Chain Length:214
Number of Molecules:4
Biological Source:Homo sapiens

Protein Blast

Polymer Type:polypeptide(L)
Description:Ephrin type-A receptor 2
Chain IDs:I, J, K, L
Chain Length:98
Number of Molecules:4
Biological Source:Homo sapiens

UniProt ID:P29317 Pfam ID:PF00041 EC:2.7.10.1

Ligand Molecules

Primary Citation

Synthetic antibodies targeting EphA2 induce diverse signaling-competent clusters with differential activation

Bruce, H.A, Singer, A.U, Filippova, E, Blazer, L, Adams, J.J, Enderle, L, Ben-David, M, Radley, E, Mao, D, Pau, V, Orlicky, S, Sicheri, S, Kourinov, I, Atwell, S, Kossiakoff, A.A, Sidhu, S.S, Lieu, R, Antonysamy, S, Druzina, Z, Ho, C, Kang, N.R, Pustilnik, A, Wang, J, Atwell, S, Lefranc, M.P, Pommie, C, Ruiz, M, Giudicelli, V, Foulquier, E, Truong, L, Thouvenin-Contet, V, Lefranc, G.Show

Protein Sci. ? ? ? (2025)

Primary Citation of related structures