ISDA

Entry Detail

PDB ID:

8T7R

Keywords:

IMMUNE SYSTEM

Title:

Crystal structure of human leukocyte antigen A*0101 in complex with the Fab of alloreactive antibody E07

Biological Source:

Source Organism:

Homo sapiens, Cytomegalovirus

Host Organism:

Homo sapiens

PDB Version:

Deposition Date:

2023-06-21

Release Date:

2024-12-25

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.84 Å

R-Value Free:

0.26

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

C 1 2 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:peptide
Chain IDs:D (auth: 0), I (auth: 1), N (auth: 2), S (auth: 3), X (auth: 4), CA (auth: 5), HA (auth: 6), MA (auth: 7), RA (auth: 8)
Chain Length:9
Number of Molecules:9
Biological Source:Cytomegalovirus

UniProt ID:P16790

Polymer Type:polypeptide(L)
Description:Light chain from antibody JTK191b E07
Chain IDs:A, F (auth: E), K (auth: I), P (auth: M), U (auth: Q), Z (auth: U), EA (auth: Y), JA (auth: c), OA (auth: g), SA (auth: k), UA (auth: o), WA (auth: s)
Chain Length:214
Number of Molecules:12
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Description:Fab heavy chain from antibody JTK191b E07
Chain IDs:B, G (auth: F), L (auth: J), Q (auth: N), V (auth: R), AA (auth: V), FA (auth: Z), KA (auth: d), PA (auth: h), TA (auth: l), VA (auth: p), XA (auth: t)
Chain Length:240
Number of Molecules:12
Biological Source:Homo sapiens

Protein Blast

Polymer Type:polypeptide(L)
Description:MHC class I antigen (Fragment)
Chain IDs:C, H (auth: G), M (auth: K), R (auth: O), W (auth: S), BA (auth: W), GA (auth: a), LA (auth: e), QA (auth: i)
Chain Length:214
Number of Molecules:9
Biological Source:Homo sapiens

UniProt ID:F6IQR9 Pfam ID:PF00129, PF07654

Protein Blast

Polymer Type:polypeptide(L)
Description:Beta-2-microglobulin
Chain IDs:E (auth: D), J (auth: H), O (auth: L), T (auth: P), Y (auth: T), DA (auth: X), IA (auth: b), NA (auth: f)
Chain Length:240
Number of Molecules:8
Biological Source:Homo sapiens

UniProt ID:P61769 Pfam ID:PF07654

Ligand Molecules

Primary Citation

B cell and antibody targeting of transplant alloantigen epitopes is supported by both self and allo-recognition

Killian Jr, J.T, King, R.G, Kizziah, J.L, Fucile, C.F, Diaz-Avalos, R, Qiu, S, Silva-Sanchez, A, Mousseau, B.J, Macon, K.J, Callahan, A.R, Yang, G, Hossain, E.M, Akther, J, Good, D.B, Kelso, S, Houp, J.A, Rosenblum, F, Porrett, P.M, Ong, S.C, Kumar, V, Ollmann Saphire, E, Kearney, J.F, Randall, T.D, Rosenberg, A.F, Green, T.J, Lund, F.E.Show

To Be Published ? ? ? (?)

Primary Citation of related structures