8T5S image
Entry Detail
PDB ID:
8T5S
EMDB ID:
Title:
Cryo-EM structure of DRH-1 helicase and C-terminal domain bound to dsRNA
Biological Source:
PDB Version:
Deposition Date:
2023-06-14
Release Date:
2024-05-15
Method Details:
Experimental Method:
Resolution:
2.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Dicer-related helicase
Chain IDs:A
Chain Length:1091
Number of Molecules:1
Biological Source:Caenorhabditis elegans
Polymer Type:polyribonucleotide
Description:RNA (30-MER)
Chain IDs:C (auth: B)
Chain Length:30
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polyribonucleotide
Description:RNA (30-MER)
Chain IDs:B (auth: C)
Chain Length:30
Number of Molecules:1
Biological Source:synthetic construct
Primary Citation
Caenorhabditis elegans Dicer acts with the RIG-I-like helicase DRH-1 and RDE-4 to cleave dsRNA.
Elife 13 ? ? (2024)
PMID: 38747717 DOI: 10.7554/eLife.93979

Abstact

Invertebrates use the endoribonuclease Dicer to cleave viral dsRNA during antiviral defense, while vertebrates use RIG-I-like Receptors (RLRs), which bind viral dsRNA to trigger an interferon response. While some invertebrate Dicers act alone during antiviral defense, Caenorhabditis elegans Dicer acts in a complex with a dsRNA binding protein called RDE-4, and an RLR ortholog called DRH-1. We used biochemical and structural techniques to provide mechanistic insight into how these proteins function together. We found RDE-4 is important for ATP-independent and ATP-dependent cleavage reactions, while helicase domains of both DCR-1 and DRH-1 contribute to ATP-dependent cleavage. DRH-1 plays the dominant role in ATP hydrolysis, and like mammalian RLRs, has an N-terminal domain that functions in autoinhibition. A cryo-EM structure indicates DRH-1 interacts with DCR-1's helicase domain, suggesting this interaction relieves autoinhibition. Our study unravels the mechanistic basis of the collaboration between two helicases from typically distinct innate immune defense pathways.

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