8T0K image
Entry Detail
PDB ID:
8T0K
EMDB ID:
Keywords:
Title:
Cryo-EM of the GDP-bound human dynamin (full-length) polymer assembled on the membrane in the super constricted state
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-06-01
Release Date:
2024-05-01
Method Details:
Experimental Method:
Resolution:
3.58 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Dynamin-1
Chain IDs:A (auth: b), B (auth: c), C (auth: f), D (auth: g)
Chain Length:876
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Cryo-EM structures of membrane-bound dynamin in a post-hydrolysis state primed for membrane fission.
Dev.Cell 59 1783 ? (2024)
PMID: 38663399 DOI: 10.1016/j.devcel.2024.04.008

Abstact

Dynamin assembles as a helical polymer at the neck of budding endocytic vesicles, constricting the underlying membrane as it progresses through the GTPase cycle to sever vesicles from the plasma membrane. Although atomic models of the dynamin helical polymer bound to guanosine triphosphate (GTP) analogs define earlier stages of membrane constriction, there are no atomic models of the assembled state post-GTP hydrolysis. Here, we used cryo-EM methods to determine atomic structures of the dynamin helical polymer assembled on lipid tubules, akin to necks of budding endocytic vesicles, in a guanosine diphosphate (GDP)-bound, super-constricted state. In this state, dynamin is assembled as a 2-start helix with an inner lumen of 3.4 nm, primed for spontaneous fission. Additionally, by cryo-electron tomography, we trapped dynamin helical assemblies within HeLa cells using the GTPase-defective dynamin K44A mutant and observed diverse dynamin helices, demonstrating that dynamin can accommodate a range of assembled complexes in cells that likely precede membrane fission.

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