8T0I image
Entry Detail
PDB ID:
8T0I
Keywords:
Title:
Backbone Dialkylation in Peptide Hairpins: (R)-Ethylpropylglycine variant
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-06-01
Release Date:
2023-08-16
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Immunoglobulin G-binding protein G
Chain IDs:A
Chain Length:17
Number of Molecules:1
Biological Source:Streptococcus sp. group G
Ligand Molecules
Primary Citation
Effects of chirality and side chain length in C alpha , alpha-dialkylated residues on beta-hairpin peptide folded structure and stability.
Org.Biomol.Chem. 21 6320 6324 (2023)
PMID: 37503895 DOI: 10.1039/d3ob00963g

Abstact

Strategic incorporation of achiral Cα,α-dialkylated amino acids with bulky substituents into peptides can be used to promote extended strand conformations and inhibit protein-protein interactions associated with amyloid formation. In this work, we evaluate the thermodynamic impact of chiral Cα,α monomers on folding preferences in such systems through introduction of a series of Cα-methylated and Cα-ethylated residues into a β-hairpin host sequence. Depending on stereochemical configuration of the artificial monomer and potential for additional hydrophobic packing, a Cα-ethyl-Cα-propyl glycine residue can provide similar or enhanced folded stability relative to an achiral Cα,α-diethyl analogue.

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Primary Citation of related structures