8SXP image
Deposition Date 2023-05-23
Release Date 2024-03-20
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8SXP
Title:
Crystal structure of long neurotoxin from the venom of the king cobra (3FTx-L15) in complex with Fab of broadly neutralizing antibody 95Mat5
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Ophiophagus hannah (Taxon ID: 8665)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.32
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Long neurotoxin 2
Chain IDs:B (auth: C)
Chain Length:68
Number of Molecules:1
Biological Source:Ophiophagus hannah
Polymer Type:polypeptide(L)
Molecule:95Mat5 Fab heavy chain
Chain IDs:C (auth: H)
Chain Length:228
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:95Mat5 Fab light chain
Chain IDs:A (auth: L)
Chain Length:212
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation

Abstact

Snakebite envenoming is a major global public health concern for which improved therapies are urgently needed. The antigenic diversity present in snake venom toxins from various species presents a considerable challenge to the development of a universal antivenom. Here, we used a synthetic human antibody library to find and develop an antibody that neutralizes long-chain three-finger α-neurotoxins produced by numerous medically relevant snakes. Our antibody bound diverse toxin variants with high affinity, blocked toxin binding to the nicotinic acetylcholine receptor in vitro, and protected mice from lethal venom challenge. Structural analysis of the antibody-toxin complex revealed a binding mode that mimics the receptor-toxin interaction. The overall workflow presented is generalizable for the development of antibodies that target conserved epitopes among antigenically diverse targets, and it offers a promising framework for the creation of a monoclonal antibody-based universal antivenom to treat snakebite envenoming.

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