8SWI image
Deposition Date 2023-05-18
Release Date 2023-12-27
Last Version Date 2023-12-27
Entry Detail
PDB ID:
8SWI
Keywords:
Title:
Crystal structure of legAS4 from Legionella pneumophila subsp. pneumophila with histone H3 (1-12)peptide
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.31
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Eukaryotic huntingtin interacting protein B
Gene (Uniprot):legAS4
Chain IDs:A
Chain Length:451
Number of Molecules:1
Biological Source:Legionella pneumophila subsp. pneumophila
Polymer Type:polypeptide(L)
Molecule:Histone H3 peptided
Gene (Uniprot):H3C1, H3C2, H3C3, H3C4, H3C6, H3C7, H3C8, H3C10, H3C11, H3C12
Chain IDs:B
Chain Length:12
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The SET and ankyrin domains of the secreted Legionella pneumophila histone methyltransferase work together to modify host chromatin.
Mbio 14 e0165523 e0165523 (2023)
PMID: 37795993 DOI: 10.1128/mbio.01655-23

Abstact

Legionella pneumophila is an intracellular bacterium responsible of Legionnaires' disease, a severe pneumonia that is often fatal when not treated promptly. The pathogen's ability to efficiently colonize the host resides in its ability to replicate intracellularly. Essential for intracellular replication is translocation of many different protein effectors via a specialized secretion system. One of them, called RomA, binds and directly modifies the host chromatin at a unique site (tri-methylation of lysine 14 of histone H3 [H3K14me]). However, the molecular mechanisms of binding are not known. Here, we resolve this question through structural characterization of RomA together with the H3 peptide. We specifically reveal an active role of the ankyrin repeats located in its C-terminal in the interaction with the histone H3 tail. Indeed, without the ankyrin domains, RomA loses its ability to act as histone methyltransferase. These results discover the molecular mechanisms by which a bacterial histone methyltransferase that is conserved in L. pneumophila strains acts to modify chromatin.

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Primary Citation of related structures