8SGY image
Deposition Date 2023-04-13
Release Date 2023-05-17
Last Version Date 2024-06-19
Entry Detail
PDB ID:
8SGY
Keywords:
Title:
Leishmania tarentolae propionyl-CoA carboxylase (alpha-5-beta-6)
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
8.62 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:propionyl-CoA carboxylase
Gene (Uniprot):LtaPh_0100500
Chain IDs:A (auth: B), H (auth: S), I (auth: V), J (auth: Z), K (auth: Y)
Chain Length:657
Number of Molecules:5
Biological Source:Leishmania tarentolae
Polymer Type:polypeptide(L)
Molecule:Propionyl-coa carboxylase beta chain, putative
Gene (Uniprot):LtaPh_2805100
Chain IDs:B (auth: C), C (auth: D), D (auth: E), E (auth: F), F (auth: G), G (auth: H)
Chain Length:489
Number of Molecules:6
Biological Source:Leishmania tarentolae
Primary Citation
CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics.
J Struct Biol X 7 100088 100088 (2023)
PMID: 37128595 DOI: 10.1016/j.yjsbx.2023.100088

Abstact

Propionyl-CoA carboxylase (PCC) is a multienzyme complex consisting of up to six α-subunits and six β-subunits. Belonging to a metabolic pathway converging on the citric acid cycle, it is present in most forms of life and irregularities in its assembly lead to serious illness in humans, known as propionic acidemia. Here, we report the cryogenic electron microscopy (cryoEM) structures and assembly of different oligomeric isomers of endogenous PCC from the parasitic protozoan Leishmania tarentolae (LtPCC). These structures and their statistical distribution reveal the mechanics of PCC assembly and disassembly at equilibrium. We show that, in solution, endogenous LtPCC β-subunits form stable homohexamers, to which different numbers of α-subunits attach. Sorting LtPCC particles into seven classes (i.e., oligomeric formulae α0β6, α1β6, α2β6, α3β6, α4β6, α5β6, α6β6) enables formulation of a model for PCC assembly. Our results suggest how multimerization regulates PCC enzymatic activity and showcase the utility of cryoEM in revealing the statistical mechanics of reaction pathways.

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Primary Citation of related structures