8SC3 image
Entry Detail
PDB ID:
8SC3
EMDB ID:
Title:
Human OCT1 bound to fenoterol in inward-open conformation
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-04-04
Release Date:
2023-10-18
Method Details:
Experimental Method:
Resolution:
3.24 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Solute carrier family 22 member 1
Chain IDs:A
Chain Length:554
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis of promiscuous substrate transport by Organic Cation Transporter 1.
Nat Commun 14 6374 6374 (2023)
PMID: 37821493 DOI: 10.1038/s41467-023-42086-9

Abstact

Organic Cation Transporter 1 (OCT1) plays a crucial role in hepatic metabolism by mediating the uptake of a range of metabolites and drugs. Genetic variations can alter the efficacy and safety of compounds transported by OCT1, such as those used for cardiovascular, oncological, and psychological indications. Despite its importance in drug pharmacokinetics, the substrate selectivity and underlying structural mechanisms of OCT1 remain poorly understood. Here, we present cryo-EM structures of full-length human OCT1 in the inward-open conformation, both ligand-free and drug-bound, indicating the basis for its broad substrate recognition. Comparison of our structures with those of outward-open OCTs provides molecular insight into the alternating access mechanism of OCTs. We observe that hydrophobic gates stabilize the inward-facing conformation, whereas charge neutralization in the binding pocket facilitates the release of cationic substrates. These findings provide a framework for understanding the structural basis of the promiscuity of drug binding and substrate translocation in OCT1.

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Primary Citation of related structures