ISDA

Deposition Date 2024-03-07

Release Date 2024-03-20

Last Version Date 2024-11-13

Entry Detail

PDB ID:

8S8W

Keywords:

VIRAL PROTEIN

Title:

SARS-CoV-2 nsp10-16 methyltransferase in complex with Sangivamycin and m7GpppA-RNA (Cap0-RNA)

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.10 Å

R-Value Free:

0.22

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 31 2 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:2'-O-methyltransferase nsp16
Gene (Uniprot):rep
Chain IDs:A
Chain Length:304
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTD1 Pfam ID:PF06460, PF09401 EC:2.7.7.48

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Non-structural protein 10
Gene (Uniprot):rep
Chain IDs:B
Chain Length:140
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTD1 Pfam ID:PF06460, PF09401 EC:2.7.7.48

Polymer Type:polyribonucleotide
Molecule:m7GpppA-RNA (Cap0-RNA)
Chain IDs:C
Chain Length:3
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules