ISDA: 8S8T

Deposition Date 2024-03-07

Release Date 2025-09-17

Last Version Date 2025-09-17

Entry Detail

PDB ID:

8S8T

Keywords:

TRANSFERASE

Title:

KOD-H4 DNA polymerase mutant in a binary complex with DNA/DNA

Biological Source:

Source Organism:

Thermococcus kodakarensis KOD1 (Taxon ID: 69014)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.00 Å

R-Value Free:

0.24

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 21 21 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DNA polymerase
Chain IDs:A
Chain Length:774
Number of Molecules:1
Biological Source:Thermococcus kodakarensis KOD1

UniProt ID:D0VWU9 Pfam ID:PF03104, PF00136

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*CP*A)-3')
Chain IDs:B (auth: P)
Chain Length:13
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*CP*TP*GP*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3')
Chain IDs:C (auth: T)
Chain Length:16
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules