ISDA

Deposition Date 2024-03-01

Release Date 2025-10-08

Last Version Date 2025-10-08

Entry Detail

PDB ID:

8S7K

Keywords:

DNA BINDING PROTEIN

Title:

M. tuberculosis gyrase holocomplex with 150 bp DNA and gepotidacin

Biological Source:

Source Organism:

Mycobacterium tuberculosis (Taxon ID: 1773)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.20 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DNA gyrase subunit B
Gene (Uniprot):gyrB
Chain IDs:C (auth: B), D
Chain Length:678
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis

UniProt ID:P9WG45 Pfam ID:PF02518, PF00204, PF01751, PF00986 EC:5.6.2.2

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DNA gyrase subunit A
Gene (Uniprot):gyrA
Chain IDs:A (auth: C), B (auth: A)
Chain Length:837
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis

UniProt ID:P9WG47 Pfam ID:PF00521, PF03989 EC:5.6.2.2

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*GP*TP*AP*TP*TP*AP*CP*CP*CP*CP*TP*TP*CP*CP*GP*GP*A)-3')
Chain IDs:E
Chain Length:150
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*GP*TP*AP*TP*TP*AP*CP*CP*CP*CP*TP*TP*CP*CP*GP*GP*A)-3')
Chain IDs:F
Chain Length:150
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

JHN

Primary Citation

M. tuberculosis gyrase holocomplex with 150 bp DNA and gepotidacin

Gedeon, A, Yab, E, Dinut, A, Sadowski, E, Capton, E, Dreneau, A, Gioia, B, Piveteau, C, Djaout, K, Lecat, E, Wehenkel, A.M, Gubellini, F, Mechaly, A, Alzari, P.M, Deprez, B, Baulard, A, Aubry, A, Willand, N, Petrella, S.Show

To Be Published ? ? ? (?)

Primary Citation of related structures