8S79 image
Deposition Date 2024-02-29
Release Date 2024-11-06
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8S79
Keywords:
Title:
Lotus japonicus NFR5 intracellular domain in complex with Nanobody 200
Biological Source:
Source Organism:
Lotus japonicus (Taxon ID: 34305)
Lama glama (Taxon ID: 9844)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.29 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 31 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nod-factor receptor 5
Gene (Uniprot):nfr5
Chain IDs:A, B
Chain Length:288
Number of Molecules:2
Biological Source:Lotus japonicus
Polymer Type:polypeptide(L)
Molecule:Nanobody 200
Chain IDs:C, D
Chain Length:123
Number of Molecules:2
Biological Source:Lama glama
Primary Citation
A conserved juxtamembrane motif in plant NFR5 receptors is essential for root nodule symbiosis.
Proc.Natl.Acad.Sci.USA 121 e2405671121 e2405671121 (2024)
PMID: 39495923 DOI: 10.1073/pnas.2405671121

Abstact

Establishment of root nodule symbiosis is initiated by the perception of bacterial Nod factor ligands by the plant LysM receptor kinases NFR1 and NFR5. Receptor signaling initiating the symbiotic pathway depends on the kinase activity of NFR1, while the signaling mechanism of the catalytically inactive NFR5 pseudokinase is unknown. Here, we present the crystal structure of the signaling-competent Lotus japonicus NFR5 intracellular domain, comprising the juxtamembrane region and pseudokinase domain. The juxtamembrane region is structurally well defined and forms two α-helices, αA and αA', which contain an exposed hydrophobic motif. We demonstrate that this "juxtamembrane motif" promotes NFR5-NFR5 and NFR1-NFR5 interactions and is essential for symbiotic signaling. Conservation analysis reveals that the juxtamembrane motif is present throughout NFR5-type receptors and is required for symbiosis signaling from barley RLK10, suggesting a conserved and broader function for this motif in plant-microbe symbioses.

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