8S6H image
Deposition Date 2024-02-27
Release Date 2024-07-24
Last Version Date 2024-09-18
Entry Detail
PDB ID:
8S6H
Keywords:
Title:
Cryo-EM Structure of the R388 plasmid conjugative pilus reveals a helical polymer characterised by an unusual pilin/phospholipid binary complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.39 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TrwL protein
Gene (Uniprot):trwL
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O (auth: 3), P (auth: 4), Q (auth: 5), R (auth: 6), S (auth: 7), T (auth: 8), U (auth: 9), V (auth: A1), W (auth: A2), X (auth: A3), Y (auth: A4), Z (auth: A5), AA (auth: A6), BA (auth: A7), CA (auth: 0), DA (auth: 1), EA (auth: 2), FA (auth: p), GA (auth: q), HA (auth: r), IA (auth: s), JA (auth: t), KA (auth: u), LA (auth: v), MA (auth: w), NA (auth: x), OA (auth: y), PA (auth: z), QA (auth: c), RA (auth: d), SA (auth: e), TA (auth: f), UA (auth: g), VA (auth: h), WA (auth: i), XA (auth: j), YA (auth: k), ZA (auth: l), AB (auth: m), BB (auth: n), CB (auth: o), DB (auth: O), EB (auth: P), FB (auth: Q), GB (auth: R), HB (auth: S), IB (auth: T), JB (auth: U), KB (auth: V), LB (auth: W), MB (auth: X), NB (auth: Y), OB (auth: Z), PB (auth: a), QB (auth: b)
Chain Length:69
Number of Molecules:69
Biological Source:Escherichia coli HB101
Ligand Molecules
Primary Citation
Cryo-EM structure of the R388 plasmid conjugative pilus reveals a helical polymer characterized by an unusual pilin/phospholipid binary complex.
Structure 32 1335 ? (2024)
PMID: 39002540 DOI: 10.1016/j.str.2024.06.009

Abstact

Bacterial conjugation is a process by which DNA is transferred unidirectionally from a donor cell to a recipient cell. It is the main means by which antibiotic resistance genes spread among bacterial populations. It is crucially dependent upon the elaboration of an extracellular appendage, termed "pilus," by a large double-membrane-spanning secretion system termed conjugative "type IV secretion system." Here we present the structure of the conjugative pilus encoded by the R388 plasmid. We demonstrate that, as opposed to all conjugative pili produced so far for cryoelectron microscopy (cryo-EM) structure determination, the conjugative pilus encoded by the R388 plasmid is greatly stimulated by the presence of recipient cells. Comparison of its cryo-EM structure with existing conjugative pilus structures highlights a number of important differences between the R388 pilus structure and that of its homologs, the most prominent being the highly distinctive conformation of its bound lipid.

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Primary Citation of related structures