8RYT image
Deposition Date 2024-02-09
Release Date 2024-06-19
Last Version Date 2024-08-21
Entry Detail
PDB ID:
8RYT
Keywords:
Title:
Structural characterization of Thogoto Virus nucleoprotein provides insights into RNA encapsidation and assembly
Biological Source:
Source Organism:
Thogotovirus (Taxon ID: 35323)
Host Organism:
Method Details:
Experimental Method:
Resolution:
18.00 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
SUBTOMOGRAM AVERAGING
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nucleoprotein
Gene (Uniprot):Segment 5
Chain IDs:A (auth: C), B (auth: A), C (auth: B), D, E, F, G, H (auth: I), I (auth: K), J (auth: L), K (auth: M), L (auth: N), M (auth: O), N (auth: P), O (auth: Q), P (auth: R)
Chain Length:445
Number of Molecules:16
Biological Source:Thogotovirus
Ligand Molecules
Primary Citation
Structural characterization of Thogoto Virus nucleoprotein provides insights into viral RNA encapsidation and RNP assembly.
Structure 32 1068 1078.e5 (2024)
PMID: 38749445 DOI: 10.1016/j.str.2024.04.016

Abstact

Orthomyxoviruses, such as influenza and thogotoviruses, are important human and animal pathogens. Their segmented viral RNA genomes are wrapped by viral nucleoproteins (NPs) into helical ribonucleoprotein complexes (RNPs). NP structures of several influenza viruses have been reported. However, there are still contradictory models of how orthomyxovirus RNPs are assembled. Here, we characterize the crystal structure of Thogoto virus (THOV) NP and found striking similarities to structures of influenza viral NPs, including a two-lobed domain architecture, a positively charged RNA-binding cleft, and a tail loop important for trimerization and viral transcription. A low-resolution cryo-electron tomography reconstruction of THOV RNPs elucidates a left-handed double helical assembly. By providing a model for RNP assembly of THOV, our study suggests conserved NP assembly and RNA encapsidation modes for thogoto- and influenza viruses.

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Primary Citation of related structures