8RX1 image
Deposition Date 2024-02-06
Release Date 2024-09-25
Last Version Date 2024-12-18
Entry Detail
PDB ID:
8RX1
Title:
CryoEM structure of the gTuRC-CM1dim complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.57 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tubulin gamma-1 chain
Gene (Uniprot):TUBG1
Chain IDs:A (auth: 1), B (auth: 2), R (auth: O), S (auth: P), T (auth: Q), U (auth: R), V (auth: S), W (auth: T), X (auth: U), Y (auth: V), Z (auth: W), AA (auth: X), BA (auth: Y), CA (auth: Z)
Chain Length:451
Number of Molecules:14
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Actin b
Chain IDs:C (auth: 7)
Chain Length:364
Number of Molecules:1
Biological Source:Spodoptera frugiperda
Polymer Type:polypeptide(L)
Molecule:Gamma-tubulin complex component 2
Gene (Uniprot):TUBGCP2
Chain IDs:D (auth: A), F (auth: C), H (auth: E), P (auth: M), IA (auth: f), NA (auth: k)
Chain Length:902
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Gamma-tubulin complex component 3
Gene (Uniprot):TUBGCP3
Chain IDs:E (auth: B), G (auth: D), I (auth: F), Q (auth: N), EA (auth: b), OA (auth: n)
Chain Length:907
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:CM1
Chain IDs:J (auth: G), K (auth: H), JA (auth: g), KA (auth: h), LA (auth: i), MA (auth: j), PA (auth: s), QA (auth: t), RA (auth: u), SA (auth: v)
Chain Length:229
Number of Molecules:10
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Gamma-tubulin complex component 4
Gene (Uniprot):TUBGCP4
Chain IDs:L (auth: I), N (auth: K)
Chain Length:667
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Gamma-tubulin complex component 5
Gene (Uniprot):TUBGCP5
Chain IDs:M (auth: J)
Chain Length:1024
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Gamma-tubulin complex component 6
Gene (Uniprot):TUBGCP6
Chain IDs:O (auth: L), GA (auth: d)
Chain Length:907
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Mitotic-spindle organizing protein 1
Gene (Uniprot):MZT1
Chain IDs:DA (auth: a), FA (auth: c)
Chain Length:902
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Mitotic-spindle organizing protein 2A
Gene (Uniprot):MZT2A
Chain IDs:HA (auth: e)
Chain Length:158
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
CDK5RAP2 activates microtubule nucleator gamma TuRC by facilitating template formation and actin release.
Dev.Cell 59 3175 ? (2024)
PMID: 39321809 DOI: 10.1016/j.devcel.2024.09.001

Abstact

To organize microtubules, cells tightly control the activity of the microtubule nucleator γ-tubulin ring complex (γTuRC). The open ring-shaped γTuRC was proposed to nucleate microtubules by a template mechanism. However, its splayed structure does not match microtubule symmetry, leaving it unclear how γTuRC becomes an efficient nucleator. Here, we identify the mechanism of γTuRC activation by CDK5RAP2 centrosomin motif 1 (CM1). Using cryoelectron microscopy (cryo-EM), we find that activation involves binding of multiple CM1 dimers to five distinct sites around the outside of the γTuRC cone, which crucially depends on regulatory modules formed by MZT2 and the N-terminal extensions of GCP2 subunits. CM1 binding promotes lateral interactions between GCP subunits to facilitate microtubule-like conformations and release of luminal actin that is integral to non-activated γTuRC. We propose a model where generation of γTuRC with an expanded conformational range, rather than perfect symmetry, is sufficient to boost nucleation activity.

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