ISDA

Deposition Date 2024-02-02

Release Date 2025-05-14

Last Version Date 2025-07-02

Entry Detail

PDB ID:

8RVY

Keywords:

OXIDOREDUCTASE

Title:

CryoEM structure of the Elp-Hdr complex of Methanothermobacter marburgensis state 1 (composite structure)

Biological Source:

Source Organism:

Methanothermobacter marburgensis (Taxon ID: 145263)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.36 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A
Gene (Uniprot):hdrA
Chain IDs:A, I (auth: a)
Chain Length:659
Number of Molecules:2
Biological Source:Methanothermobacter marburgensis

UniProt ID:Q50756 Pfam ID:PF01262, PF00037, PF07992 EC:1.8.98.5

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Formate dehydrogenase, alpha subunit
Gene (Uniprot):fdhA2
Chain IDs:C (auth: D)
Chain Length:342
Number of Molecules:1
Biological Source:Methanothermobacter marburgensis

UniProt ID:D9PY04 Pfam ID:PF04879

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Formate dehydrogenase, beta subunit
Gene (Uniprot):fdhB
Chain IDs:B (auth: E)
Chain Length:380
Number of Molecules:1
Biological Source:Methanothermobacter marburgensis

UniProt ID:D9PY03 Pfam ID:PF04422, PF04432, PF13183

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Methyl viologen-reducing hydrogenase, subunit D-related protein
Gene (Uniprot):MTBMA_c15210
Chain IDs:D (auth: F)
Chain Length:136
Number of Molecules:1
Biological Source:Methanothermobacter marburgensis

UniProt ID:D9PY02 Pfam ID:PF02662

Protein Blast

Polymer Type:polypeptide(L)
Molecule:H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit B
Gene (Uniprot):hdrB
Chain IDs:E (auth: b), F (auth: B)
Chain Length:302
Number of Molecules:2
Biological Source:Methanothermobacter marburgensis

UniProt ID:Q50755 Pfam ID:PF02754 EC:1.8.7.3

Protein Blast

Polymer Type:polypeptide(L)
Molecule:H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit C
Gene (Uniprot):hdrC
Chain IDs:G (auth: c), H (auth: C)
Chain Length:185
Number of Molecules:2
Biological Source:Methanothermobacter marburgensis

UniProt ID:Q50754 Pfam ID:PF13183 EC:1.8.98.5

Ligand Molecules