8RI9 image
Entry Detail
PDB ID:
8RI9
EMDB ID:
Keywords:
Title:
Late alpha-Synuclein fibril structure from liquid-liquid phase separations.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-12-18
Release Date:
2024-03-06
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alpha-synuclein
Chain IDs:A (auth: B), B (auth: C), C (auth: A), D, E
Chain Length:140
Number of Molecules:5
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure-Toxicity Relationship in Intermediate Fibrils from alpha-Synuclein Condensates.
J.Am.Chem.Soc. 146 10537 10549 (2024)
PMID: 38567991 DOI: 10.1021/jacs.3c14703

Abstact

The aberrant aggregation of α-synuclein (αS) into amyloid fibrils is associated with a range of highly debilitating neurodegenerative conditions, including Parkinson's disease. Although the structural properties of mature amyloids of αS are currently understood, the nature of transient protofilaments and fibrils that appear during αS aggregation remains elusive. Using solid-state nuclear magnetic resonance (ssNMR), cryogenic electron microscopy (cryo-EM), and biophysical methods, we here characterized intermediate amyloid fibrils of αS forming during the aggregation from liquid-like spherical condensates to mature amyloids adopting the structure of pathologically observed aggregates. These transient amyloid intermediates, which induce significant levels of cytotoxicity when incubated with neuronal cells, were found to be stabilized by a small core in an antiparallel β-sheet conformation, with a disordered N-terminal region of the protein remaining available to mediate membrane binding. In contrast, mature amyloids that subsequently appear during the aggregation showed different structural and biological properties, including low levels of cytotoxicity, a rearranged structured core embedding also the N-terminal region, and a reduced propensity to interact with the membrane. The characterization of these two fibrillar forms of αS, and the use of antibodies and designed mutants, enabled us to clarify the role of critical structural elements endowing intermediate amyloid species with the ability to interact with membranes and induce cytotoxicity.

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Primary Citation of related structures