8RCI image
Entry Detail
PDB ID:
8RCI
Title:
Human p53 DNA-binding domain bound to DARPin C10
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2023-12-06
Release Date:
2024-12-18
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cellular tumor antigen p53
Chain IDs:A
Chain Length:202
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:DARPin C10
Chain IDs:B (auth: E)
Chain Length:126
Number of Molecules:1
Biological Source:synthetic construct
Primary Citation
DARPin-induced reactivation of p53 in HPV-positive cells.
Nat.Struct.Mol.Biol. 32 790 801 (2025)
PMID: 39789211 DOI: 10.1038/s41594-024-01456-7

Abstact

Infection of cells with high-risk strains of the human papillomavirus (HPV) causes cancer in various types of epithelial tissue. HPV infections are responsible for ~4.5% of all cancers worldwide. Tumorigenesis is based on the inactivation of key cellular control mechanisms by the viral proteins E6 and E7. The HPV E6 protein interacts with the cellular E3 ligase E6AP, and this complex binds to the p53 DNA-binding domain, which results in degradation of p53. Inhibition of this interaction has the potential to reactivate p53, thus preventing oncogenic transformation. Here we describe the characterization of a designed ankyrin repeat protein that binds to the same site as the HPV E6 protein, thereby displacing the E3 ligase and stabilizing p53. Interaction with the designed ankyrin repeat protein does not affect p53 DNA binding or the crucial MDM2 negative feedback loop but reactivates a p53-dependent transcriptional program in HeLa (HPV18-positive) and SiHa (HPV16-positive) cells, suggesting a potential therapeutic use.

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Primary Citation of related structures