8R4A image
Deposition Date 2023-11-13
Release Date 2024-11-20
Last Version Date 2024-11-27
Entry Detail
PDB ID:
8R4A
Keywords:
Title:
Cryo-EM structure of the D87G lysozyme amyloid fibril
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
HELICAL
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lysozyme C
Gene (Uniprot):LYZ
Chain IDs:A, B, C, D, E, F, G, H, I
Chain Length:130
Number of Molecules:9
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM structure of a lysozyme-derived amyloid fibril from hereditary amyloidosis.
Nat Commun 15 9648 9648 (2024)
PMID: 39511224 DOI: 10.1038/s41467-024-54091-7

Abstact

Systemic ALys amyloidosis is a debilitating protein misfolding disease that arises from the formation of amyloid fibrils from C-type lysozyme. We here present a 2.8 Å cryo-electron microscopy structure of an amyloid fibril, which was isolated from the abdominal fat tissue of a patient who expressed the D87G variant of human lysozyme. We find that the fibril possesses a stable core that is formed by all 130 residues of the fibril precursor protein. There are four disulfide bonds in each fibril protein that connect the same residues as in the globularly folded protein. As the conformation of lysozyme in the fibril is otherwise fundamentally different from native lysozyme, our data provide a structural rationale for the need of protein unfolding in the development of systemic ALys amyloidosis.

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Primary Citation of related structures